PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5XP1

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	7	QASQDIIKYLN	BBABBAEABBB
A	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	62.5	L2	8	L2-8-1	13	YEASNLQA	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	71.4	L3	9	L3-9-cis7-1	10	QQYQSlPKT	BBAABBbBB
A	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	83.3	L4	6	L4-6-1	8	GSGTDY	EBEABB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	6	QASQDIIKYLN	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	62.5	L2	8	L2-8-1	13	YEASNLQA	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	71.4	L3	9	L3-9-cis7-1	10	QQYQSlPKT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	83.3	L4	6	L4-6-1	8	GSGTDY	EBEABB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	9	QASQDIIKYLN	BBABBAEABBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	62.5	L2	8	L2-8-1	13	YEASNLQA	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	71.4	L3	9	L3-9-cis7-1	14	QQYQSlPKT	BBAABBbBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	83.3	L4	6	L4-6-1	11	GSGTDY	EBEABB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	8	QASQDIIKYLN	BBABBAEABBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	62.5	L2	8	L2-8-1	12	YEASNLQA	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	71.4	L3	9	L3-9-cis7-1	14	QQYQSlPKT	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	83.3	L4	6	L4-6-1	11	GSGTDY	EBEABB
E	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	8	QASQDIIKYLN	BBABBAEABBB
E	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	62.5	L2	8	L2-8-1	10	YEASNLQA	BLLABBBB
E	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	71.4	L3	9	L3-9-cis7-1	8	QQYQSlPKT	BBAABBbBB
E	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	83.3	L4	6	L4-6-1	14	GSGTDY	EBEABB
F	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	9	QASQDIIKYLN	BBABBAEABBB
F	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	62.5	L2	8	L2-8-1	11	YEASNLQA	BLLABBBB
F	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	71.4	L3	9	L3-9-cis7-1	8	QQYQSlPKT	BBAABBbBB
F	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	83.3	L4	6	L4-6-1	14	GSGTDY	EBEABB
G	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	17	QASQDIIKYLN	BBABBAEABBB
G	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	62.5	L2	8	L2-8-1	13	YEASNLQA	BLLABBBB
G	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	71.4	L3	9	L3-9-cis7-1	11	QQYQSlPKT	BBAABBbBB
G	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	83.3	L4	6	L4-6-1	21	GSGTDY	EBEABB
H	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	17	QASQDIIKYLN	BBABBAEABBB
H	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	62.5	L2	8	L2-8-1	12	YEASNLQA	BLLABBBB
H	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	71.4	L3	9	L3-9-cis7-1	11	QQYQSlPKT	BBAABBbBB
H	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	83.3	L4	6	L4-6-1	21	GSGTDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022