PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5XLI

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
a	kappa	Mus.musculus	Mo_IGKV4-55*01	97.1	Mo_IGKV4-55*01	90.0	L1	10	L1-10-1	9	SASSSVTYMY	BBABBBABBB
a	kappa	Mus.musculus	Mo_IGKV4-55*01	97.1	Mo_IGKV4-55*01	100.0	L2	8	L2-8-1	4	YDTSNLAS	BLLABBBB
a	kappa	Mus.musculus	Mo_IGKV4-55*01	97.1	Mo_IGKV4-55*01	87.5	L3	9	L3-9-cis7-*	-1	QQWSSYPLT	BBBABBbBB
a	kappa	Mus.musculus	Mo_IGKV4-55*01	97.1	Mo_IGKV4-55*01	100.0	L4	6	L4-6-1	12	GSGTSY	EBEABB
b	kappa	Mus.musculus	Mo_IGKV4-55*01	97.1	Mo_IGKV4-55*01	90.0	L1	10	L1-10-1	5	SASSSVTYMY	BBABBBABBB
b	kappa	Mus.musculus	Mo_IGKV4-55*01	97.1	Mo_IGKV4-55*01	100.0	L2	8	L2-8-1	6	YDTSNLAS	BLLABBBB
b	kappa	Mus.musculus	Mo_IGKV4-55*01	97.1	Mo_IGKV4-55*01	87.5	L3	9	L3-9-cis7-*	-1	QQWSSYPLT	BBBABBbBB
b	kappa	Mus.musculus	Mo_IGKV4-55*01	97.1	Mo_IGKV4-55*01	100.0	L4	6	L4-6-1	7	GSGTSY	EBEABB
c	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	92.3	H1	13	H1-13-1	7	AASGFTFSGFGMH	BBBLBBAAABBBB
c	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	90.0	H2	10	H2-10-2	9	YISSGSSLIY	BBBAALABBB
c	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	50.0	H3	13	H3-13-*	-1	ATSLYYGTPWFAY	BBBABAABBBBAB
c	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	100.0	H4	8	H4-8-1	8	RDNPKNTL	BBAAALBB
d	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	92.3	H1	13	H1-13-1	6	AASGFTFSGFGMH	BBBLBBAAABBBB
d	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	90.0	H2	10	H2-10-2	11	YISSGSSLIY	BBBAALABBB
d	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	50.0	H3	13	H3-13-*	-1	ATSLYYGTPWFAY	BBBABAABBBBAB
d	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	100.0	H4	8	H4-8-1	5	RDNPKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022