PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5XJM

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	92.3	H1	13	H1-13-1	13	AASGFTFSGFGMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	90.0	H2	10	H2-10-2	12	YISSGSSLIY	BBBAALABBB
H	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	50.0	H3	13	H3-13-*	-1	ATSLYYGTPWFAY	BBALBLLBBBBAB
H	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	100.0	H4	8	H4-8-1	7	RDNPKNTL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV4-55*01	97.1	Mo_IGKV4-55*01	90.0	L1	10	L1-10-1	17	SASSSVTYMY	BBABBBABBB
L	kappa	Mus.musculus	Mo_IGKV4-55*01	97.1	Mo_IGKV4-55*01	100.0	L2	8	L2-8-1	9	YDTSNLAS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV4-55*01	97.1	Mo_IGKV4-55*01	87.5	L3	9	L3-9-cis7-*	-1	QQWSSYPLT	BBBABBbBB
L	kappa	Mus.musculus	Mo_IGKV4-55*01	97.1	Mo_IGKV4-55*01	100.0	L4	6	L4-6-1	13	GSGTSY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022