PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5XJ4

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-7*01	100.0	Hu_IGHV3-7*01	92.3	H1	13	H1-13-1	6	AASGFTFSRYWMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-7*01	100.0	Hu_IGHV3-7*01	100.0	H2	10	H2-10-2	6	NIKQDGSEKY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-7*01	100.0	Hu_IGHV3-7*01	100.0	H3	14	H3-14-*	-1	AREGGWFGELAFDY	BBBBEAALAAEBAB
H	heavy	Homo.sapiens	Hu_IGHV3-7*01	100.0	Hu_IGHV3-7*01	100.0	H4	8	H4-8-1	6	RDNAKNSL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	98.6	Hu_IGKV3D-20*02	91.7	L1	12	L1-12-2	5	RASQRVSsSYLA	BBABBBBLLBBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	98.6	Hu_IGKV3D-20*02	100.0	L2	8	L2-8-1	6	YDASSRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	98.6	Hu_IGKV3D-20*02	28.6	L3	9	L3-9-cis7-1	10	QQYGSLPWT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	98.6	Hu_IGKV3D-20*02	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022