PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5XF1

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	100.0	H1	13	H1-13-1	13	AASGFTFSSYGMH	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	70.0	H2	10	H2-10-*	-1	VMYYDGSNKD	BBBAAbABBB
C	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	100.0	H3	21	H3-21-*	-1	AREKDhydiltgYNYYYGLDV
C	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV1-17*01	97.1	Hu_IGKV1-17*01	100.0	L1	11	L1-11-1	13	RASQGIRNDLG	BBABBAEABBB
D	kappa	Homo.sapiens	Hu_IGKV1-17*01	97.1	Hu_IGKV1-17*01	87.5	L2	8	L2-8-1	13	YAASSLES	BLEABBBB
D	kappa	Homo.sapiens	Hu_IGKV1-17*01	97.1	Hu_IGKV1-17*01	85.7	L3	9	L3-9-cis7-1	8	LQHNSNPLT	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV1-17*01	97.1	Hu_IGKV1-17*01	100.0	L4	6	L4-6-1	14	GSGTEF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	100.0	H1	13	H1-13-1	14	AASGFTFSSYGMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	70.0	H2	10	H2-10-*	-1	VMYYDGSNKD	BBBAAbABBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	100.0	H3	21	H3-21-*	-1	AREKDhydiltgYNYYYGLDV
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	6	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-17*01	97.1	Hu_IGKV1-17*01	100.0	L1	11	L1-11-1	13	RASQGIRNDLG	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-17*01	97.1	Hu_IGKV1-17*01	87.5	L2	8	L2-8-1	12	YAASSLES	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-17*01	97.1	Hu_IGKV1-17*01	85.7	L3	9	L3-9-cis7-1	8	LQHNSNPLT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-17*01	97.1	Hu_IGKV1-17*01	100.0	L4	6	L4-6-1	14	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022