PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5X5X

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-69*02	90.4	Mo_IGHV1-69*02	69.2	H1	13	H1-13-*	-1	KTSGYTFNNYWIH	BBBEBBABBBBBB
H	heavy	Mus.musculus	Mo_IGHV1-69*02	90.4	Mo_IGHV1-69*02	80.0	H2	10	H2-10-1	9	EIDPSDGYSN	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-69*02	90.4	Mo_IGHV1-69*02	0.0	H3	9	H3-9-*	-1	TSSTSVGGS	BBBBAAEEB
H	heavy	Mus.musculus	Mo_IGHV1-69*02	90.4	Mo_IGHV1-69*02	100.0	H4	8	H4-8-1	10	VDKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	91.3	Mo_IGKV1-110*01	81.2	L1	16	L1-16-1	4	TSSQSLlhsngDTYLH	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	91.3	Mo_IGKV1-110*01	75.0	L2	8	L2-8-1	7	YTLSNRFS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	91.3	Mo_IGKV1-110*01	85.7	L3	9	L3-9-cis7-1	8	SQTTHVPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	91.3	Mo_IGKV1-110*01	100.0	L4	6	L4-6-3	14	GSGTDF	EBAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022