PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5X2P

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-37*01	90.4	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	10	KASGYSFTGYSMN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-37*01	90.4	Mo_IGHV1-37*01	80.0	H2	10	H2-10-1	6	LINPYNGDTT	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-37*01	90.4	Mo_IGHV1-37*01	100.0	H3	17	H3-17-*	-1	ARSGRgapTTTTAWFTY
H	heavy	Mus.musculus	Mo_IGHV1-37*01	90.4	Mo_IGHV1-37*01	87.5	H4	8	H4-8-1	7	VDRSSSTA	BBAAALBB
J	heavy	Mus.musculus	Mo_IGHV1-37*01	90.4	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	10	KASGYSFTGYSMN	BBBLBBAAABBBB
J	heavy	Mus.musculus	Mo_IGHV1-37*01	90.4	Mo_IGHV1-37*01	80.0	H2	10	H2-10-1	8	LINPYNGDTT	BBBAAALBBB
J	heavy	Mus.musculus	Mo_IGHV1-37*01	90.4	Mo_IGHV1-37*01	100.0	H3	17	H3-17-*	-1	ARSGRgapTTTTAWFTY
J	heavy	Mus.musculus	Mo_IGHV1-37*01	90.4	Mo_IGHV1-37*01	87.5	H4	8	H4-8-1	6	VDRSSSTA	BBAAALBB
K	kappa	Mus.musculus	Mo_IGKV3-5*01	97.1	Mo_IGKV3-5*01	100.0	L1	15	L1-15-1	9	RASESVDSYgnsfMH	BBABBABBLLBBBBB
K	kappa	Mus.musculus	Mo_IGKV3-5*01	97.1	Mo_IGKV3-5*01	87.5	L2	8	L2-8-1	10	SRASNLES	BLLABBBB
K	kappa	Mus.musculus	Mo_IGKV3-5*01	97.1	Mo_IGKV3-5*01	85.7	L3	9	L3-9-cis7-1	5	QQTNEDPRT	BBAABBbBB
K	kappa	Mus.musculus	Mo_IGKV3-5*01	97.1	Mo_IGKV3-5*01	100.0	L4	6	L4-6-1	8	GSRTDF	EBEABB
L	kappa	Mus.musculus	Mo_IGKV3-5*01	97.1	Mo_IGKV3-5*01	100.0	L1	15	L1-15-1	9	RASESVDSYgnsfMH	BBABBABBLLBBBBB
L	kappa	Mus.musculus	Mo_IGKV3-5*01	97.1	Mo_IGKV3-5*01	87.5	L2	8	L2-8-1	8	SRASNLES	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV3-5*01	97.1	Mo_IGKV3-5*01	85.7	L3	9	L3-9-cis7-1	9	QQTNEDPRT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV3-5*01	97.1	Mo_IGKV3-5*01	100.0	L4	6	L4-6-1	7	GSRTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022