PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5X0T

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV6-6*02	98.6	Mo_IGHV6-6*02	92.3	H1	13	H1-13-1	9	VASGFTFSNFWMN	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV6-6*02	98.6	Mo_IGHV6-6*02	100.0	H2	12	H2-12-1	10	EIRlkSNNYATH	BBBBAAALLBBB
A	heavy	Mus.musculus	Mo_IGHV6-6*02	98.6	Mo_IGHV6-6*02	50.0	H3	7	H3-7-*	-1	TSYDYEY	BBBLLAB
A	heavy	Mus.musculus	Mo_IGHV6-6*02	98.6	Mo_IGHV6-6*02	100.0	H4	8	H4-8-1	6	RDDSKSSV	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV6-20*01	100.0	Mo_IGKV6-20*01	100.0	L1	11	L1-11-1	8	KASENVGTYVS	BBABBAEABBB
B	kappa	Mus.musculus	Mo_IGKV6-20*01	100.0	Mo_IGKV6-20*01	100.0	L2	8	L2-8-1	10	YGASNRYT	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV6-20*01	100.0	Mo_IGKV6-20*01	100.0	L3	9	L3-9-cis7-1	10	GQSYSYPFT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV6-20*01	100.0	Mo_IGKV6-20*01	100.0	L4	6	L4-6-1	9	GSATDF	EBEABB
C	heavy	Mus.musculus	Mo_IGHV6-6*02	98.6	Mo_IGHV6-6*02	92.3	H1	13	H1-13-1	9	VASGFTFSNFWMN	BBBLBBAAABBBB
C	heavy	Mus.musculus	Mo_IGHV6-6*02	98.6	Mo_IGHV6-6*02	100.0	H2	12	H2-12-1	10	EIRlkSNNYATH	BBBBAAALLBBB
C	heavy	Mus.musculus	Mo_IGHV6-6*02	98.6	Mo_IGHV6-6*02	50.0	H3	7	H3-7-*	-1	TSYDYEY	BBBLLAB
C	heavy	Mus.musculus	Mo_IGHV6-6*02	98.6	Mo_IGHV6-6*02	100.0	H4	8	H4-8-1	7	RDDSKSSV	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV6-20*01	100.0	Mo_IGKV6-20*01	100.0	L1	11	L1-11-1	8	KASENVGTYVS	BBABBAEABBB
D	kappa	Mus.musculus	Mo_IGKV6-20*01	100.0	Mo_IGKV6-20*01	100.0	L2	8	L2-8-1	10	YGASNRYT	BLLABBBB
D	kappa	Mus.musculus	Mo_IGKV6-20*01	100.0	Mo_IGKV6-20*01	100.0	L3	9	L3-9-cis7-1	10	GQSYSYPFT	BBAABBbBB
D	kappa	Mus.musculus	Mo_IGKV6-20*01	100.0	Mo_IGKV6-20*01	100.0	L4	6	L4-6-1	9	GSATDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022