PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5WYM

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.0	CDRLenMismatch	-1.0	L1	11	L1-11-2	6	RASQSISSYLA	BBABBALLBBB
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.0	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	21	YGASTRAT	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.0	Hu_IGKV3-20*01	100.0	L3	9	L3-9-cis7-1	8	QQYGSSPRT	BBAABBbBB
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
A	heavy	Homo.sapiens	Hu_IGHV3-30*01	97.3	Hu_IGHV3-30*01	100.0	H1	13	H1-13-1	7	AASGFTFSSYAMH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-30*01	97.3	Hu_IGHV3-30*01	80.0	H2	10	H2-10-2	9	VISHGGSNKY	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-30*01	97.3	Hu_IGHV3-30*01	100.0	H3	13	H3-13-*	-1	ARDFSWRGYYMDV	BBBABAALABBAB
A	heavy	Homo.sapiens	Hu_IGHV3-30*01	97.3	Hu_IGHV3-30*01	100.0	H4	8	H4-8-1	6	RDNSKNTL	BBAAALBB
C	heavy	Homo.sapiens	Hu_IGHV3-30*01	97.3	Hu_IGHV3-30*01	100.0	H1	13	H1-13-1	7	AASGFTFSSYAMH	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-30*01	97.3	Hu_IGHV3-30*01	80.0	H2	10	H2-10-2	7	VISHGGSNKY	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-30*01	97.3	Hu_IGHV3-30*01	100.0	H3	13	H3-13-*	-1	ARDFSWRGYYMDV	BBBABAALABBAB
C	heavy	Homo.sapiens	Hu_IGHV3-30*01	97.3	Hu_IGHV3-30*01	100.0	H4	8	H4-8-1	6	RDNSKNTL	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.0	CDRLenMismatch	-1.0	L1	11	L1-11-2	7	RASQSISSYLA	BBABBALLBBB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.0	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	21	YGASTRAT	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.0	Hu_IGKV3-20*01	100.0	L3	9	L3-9-cis7-1	12	QQYGSSPRT	BBAABBbBB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	13	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022