PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5WNB

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	87.3	Hu_IGHV3-9*01	46.2	H1	13	H1-13-*	-1	VGSGLrFEEHAMH
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	87.3	Hu_IGHV3-9*01	90.0	H2	10	H2-10-2	12	GISWNSGSVG	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	87.3	Hu_IGHV3-9*01	33.3	H3	17	H3-17-*	-1	AimvATTKNDFHYYKDV
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	87.3	Hu_IGHV3-9*01	75.0	H4	8	H4-8-1	10	RDNAKDIL	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV3-9*01	87.3	Hu_IGHV3-9*01	46.2	H1	13	H1-13-1	17	VGSGLRFEEHAMH	BBBLBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV3-9*01	87.3	Hu_IGHV3-9*01	90.0	H2	10	H2-10-2	12	GISWNSGSVG	BBBAALABBB
I	heavy	Homo.sapiens	Hu_IGHV3-9*01	87.3	Hu_IGHV3-9*01	33.3	H3	17	H3-17-*	-1	AimvATTKNDFHYYKDV
I	heavy	Homo.sapiens	Hu_IGHV3-9*01	87.3	Hu_IGHV3-9*01	75.0	H4	8	H4-8-1	9	RDNAKDIL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	81.8	L1	11	L1-11-1	7	RASQSVSNHLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	75.0	L2	8	L2-8-1	7	YETSNRAT	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	71.4	L3	8	L3-8-1	6	QQRNNWYT	BBAABEBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB
M	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	81.8	L1	11	L1-11-1	8	RASQSVSNHLA	BBABBAEABBB
M	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	75.0	L2	8	L2-8-1	7	YETSNRAT	BLEABBBB
M	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	71.4	L3	8	L3-8-1	7	QQRNNWYT	BBAABEBB
M	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022