PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5WI9

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	91.7	L1	12	L1-12-1	10	RASQSVSsTYLA	BBABBBBAAABB
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	4	YGASSRAT	BLLABBBB
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	85.7	L3	9	L3-9-cis7-1	15	QQSGSSPLT	BBAABBbBB
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB
F	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	84.6	H1	13	H1-13-1	12	AASGFTFSNYGIH	BBBLBBAAABBBB
F	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	90.0	H2	10	H2-10-2	10	VIWYDGSIKY	BBBAALABBB
F	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H3	17	H3-17-*	-1	ARDRAAaglHYYYGMDV
F	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	6	RDNSKNTL	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	84.6	H1	13	H1-13-1	9	AASGFTFSNYGIH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	90.0	H2	10	H2-10-2	11	VIWYDGSIKY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H3	17	H3-17-*	-1	ARDRAAaglHYYYGMDV
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	6	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	91.7	L1	12	L1-12-1	9	RASQSVSsTYLA	BBABBBBAAABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	7	YGASSRAT	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	85.7	L3	9	L3-9-cis7-1	13	QQSGSSPLT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022