PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5WDF

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	69.2	H1	13	H1-13-1	16	SASGFDFDNAWMT	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	33.3	H2	12	H2-12-1	12	RITGpgEGWSVD	BBBBAAALLBBB
A	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	0.0	H3	22	H3-22-*	-1	ARTGKYYDfwfgyppgEEYFQD
A	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	75.0	H4	8	H4-8-1	8	RDNTKNTL	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV3-19*01	89.4	Hu_IGLV3-19*01	81.8	L1	11	L1-11-4	8	RGDSLRSHYAS	BBAAAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-19*01	89.4	Hu_IGLV3-19*01	100.0	L2	8	L2-8-4	21	YGKNNRPS	BEABBBBB
B	lambda	Homo.sapiens	Hu_IGLV3-19*01	89.4	Hu_IGLV3-19*01	55.6	L3	12	L3-12-*	-1	SSRDKSGSRlSV
B	lambda	Homo.sapiens	Hu_IGLV3-19*01	89.4	Hu_IGLV3-19*01	66.7	L4	6	L4-6-2	14	ASGNRA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	69.2	H1	13	H1-13-*	-1	SASGFDFDNAWMT	BBBEBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	33.3	H2	12	H2-12-1	12	RITGpgEGWSVD	BBBBAAALLBBB
H	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	0.0	H3	22	H3-22-*	-1	ARTGKYYDfwfgyppgEEYFQD
H	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	75.0	H4	8	H4-8-1	5	RDNTKNTL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-19*01	89.4	Hu_IGLV3-19*01	81.8	L1	11	L1-11-4	7	RGDSLRSHYAS	BBAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-19*01	89.4	Hu_IGLV3-19*01	100.0	L2	8	L2-8-4	19	YGKNNRPS	BEABBBBB
L	lambda	Homo.sapiens	Hu_IGLV3-19*01	89.4	Hu_IGLV3-19*01	55.6	L3	12	L3-12-*	-1	SSRDKSGSRlSV
L	lambda	Homo.sapiens	Hu_IGLV3-19*01	89.4	Hu_IGLV3-19*01	66.7	L4	6	L4-6-2	8	ASGNRA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022