PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5W5X

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Rattus.norvegicus	Ra_IGHV1-28*01	94.5	Ra_IGHV1-28*01	92.3	H1	13	H1-13-1	11	KASGYTFTNYDMH	BBBLBBAAABBBB
H	heavy	Rattus.norvegicus	Ra_IGHV1-28*01	94.5	Ra_IGHV1-28*01	100.0	H2	10	H2-10-1	9	WIYPGNGNTK	BBBAAALBBB
H	heavy	Rattus.norvegicus	Ra_IGHV1-28*01	94.5	Ra_IGHV1-28*01	50.0	H3	11	H3-11-*	-1	VREGLGITFEY	BBBBBLBBBAB
H	heavy	Rattus.norvegicus	Ra_IGHV1-28*01	94.5	Ra_IGHV1-28*01	87.5	H4	8	H4-8-1	9	ADKSSTTA	BBAAALBB
L	kappa	Rattus.norvegicus	Ra_IGKV22S7*01	94.2	Ra_IGKV22S7*01	81.8	L1	11	L1-11-1	11	KASQNVNKYLD	BBABBAEABBB
L	kappa	Rattus.norvegicus	Ra_IGKV22S7*01	94.2	Ra_IGKV22S7*01	62.5	L2	8	L2-8-1	9	YHTNSLPT	BLLABBBB
L	kappa	Rattus.norvegicus	Ra_IGKV22S7*01	94.2	Ra_IGKV22S7*01	57.1	L3	8	L3-8-1	7	LQHDSGLT	BBAABEBB
L	kappa	Rattus.norvegicus	Ra_IGKV22S7*01	94.2	Ra_IGKV22S7*01	83.3	L4	6	L4-6-*	-1	GSGTDF	BALABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022