PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5W3M

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Mus.musculus	Mo_IGHV2-6-7*01	83.3	Mo_IGHV2-6-7*01	76.9	H1	13	H1-13-1	14	TVAGFSLTAYGVA	BBBLBBAAABBBB
E	heavy	Mus.musculus	Mo_IGHV2-6-7*01	83.3	Mo_IGHV2-6-7*01	55.6	H2	9	H2-9-1	20	AIWAAGATD	BBBAALBBB
E	heavy	Mus.musculus	Mo_IGHV2-6-7*01	83.3	Mo_IGHV2-6-7*01	100.0	H3	10	H3-10-*	-1	AREWDAYGDY	BBBBLLBBBL
E	heavy	Mus.musculus	Mo_IGHV2-6-7*01	83.3	Mo_IGHV2-6-7*01	100.0	H4	8	H4-8-1	9	KDNSKSQV	BBAAALBB
G	kappa	Mus.musculus	Mo_IGKV12-41*01	76.8	Mo_IGKV12-41*01	90.9	L1	11	L1-11-2	9	RASGNIHNALA	BBABBALLBBB
G	kappa	Mus.musculus	Mo_IGKV12-41*01	76.8	Mo_IGKV12-41*01	50.0	L2	8	L2-8-1	14	YAAAALAA	BLLABBBB
G	kappa	Mus.musculus	Mo_IGKV12-41*01	76.8	Mo_IGKV12-41*01	100.0	L3	9	L3-9-cis7-2	34	QHFWSTPYT	BBABLBbBB
G	kappa	Mus.musculus	Mo_IGKV12-41*01	76.8	Mo_IGKV12-41*01	83.3	L4	6	L4-6-1	11	GSGTAY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022