PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5W08

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	heavy	Homo.sapiens	Hu_IGHV1-2*02	90.4	Hu_IGHV1-2*02	76.9	H1	13	H1-13-1	9	KTSGYTFTAYYLH	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV1-2*02	90.4	Hu_IGHV1-2*02	80.0	H2	10	H2-10-1	12	WINPNTGDTN	BBBAAALBBB
G	heavy	Homo.sapiens	Hu_IGHV1-2*02	90.4	Hu_IGHV1-2*02	50.0	H3	26	H3-26-*	-1	AKDltlmyvfdsgwaRGAHDYYGMDV
G	heavy	Homo.sapiens	Hu_IGHV1-2*02	90.4	Hu_IGHV1-2*02	87.5	H4	8	H4-8-1	6	RDTSITTA	BBAAALBB
H	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.0	Hu_IGLV2-14*02	71.4	L1	14	L1-14-*	-1	TGTNSDVGTfDLVS	BBABLBAAABAABB
H	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.0	Hu_IGLV2-14*02	87.5	L2	8	L2-8-1	12	YEGSRRPS	BLLABBBB
H	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.0	Hu_IGLV2-14*02	0.0	L3	8	L3-8-*	-1	SSYAGSVV	BBBBLBBB
H	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.0	Hu_IGLV2-14*02	100.0	L4	6	L4-6-*	-1	KSGNTA	BBAABB
I	heavy	Homo.sapiens	Hu_IGHV1-2*02	90.4	Hu_IGHV1-2*02	76.9	H1	13	H1-13-1	8	KTSGYTFTAYYLH	BBBLBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV1-2*02	90.4	Hu_IGHV1-2*02	80.0	H2	10	H2-10-1	12	WINPNTGDTN	BBBAAALBBB
I	heavy	Homo.sapiens	Hu_IGHV1-2*02	90.4	Hu_IGHV1-2*02	50.0	H3	26	H3-26-*	-1	AKDltlmyvfdsgwaRGAHDYYGMDV
I	heavy	Homo.sapiens	Hu_IGHV1-2*02	90.4	Hu_IGHV1-2*02	87.5	H4	8	H4-8-1	6	RDTSITTA	BBAAALBB
J	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.0	Hu_IGLV2-14*02	71.4	L1	14	L1-14-*	-1	TGTNSDVGTfDLVS	BBBBLBAAABALBB
J	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.0	Hu_IGLV2-14*02	87.5	L2	8	L2-8-1	12	YEGSRRPS	BLLABBBB
J	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.0	Hu_IGLV2-14*02	0.0	L3	8	L3-8-*	-1	SSYAGSVV	BBBBLBBB
J	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.0	Hu_IGLV2-14*02	100.0	L4	6	L4-6-2	19	KSGNTA	BBEABB
K	heavy	Homo.sapiens	Hu_IGHV1-2*02	90.4	Hu_IGHV1-2*02	76.9	H1	13	H1-13-1	8	KTSGYTFTAYYLH	BBBLBBAAABBBB
K	heavy	Homo.sapiens	Hu_IGHV1-2*02	90.4	Hu_IGHV1-2*02	80.0	H2	10	H2-10-1	12	WINPNTGDTN	BBBAAALBBB
K	heavy	Homo.sapiens	Hu_IGHV1-2*02	90.4	Hu_IGHV1-2*02	50.0	H3	26	H3-26-*	-1	AKDltlmyvfdsgwaRGAHDYYGMDV
K	heavy	Homo.sapiens	Hu_IGHV1-2*02	90.4	Hu_IGHV1-2*02	87.5	H4	8	H4-8-1	6	RDTSITTA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.0	Hu_IGLV2-14*02	71.4	L1	14	L1-14-*	-1	TGTNSDVGTfDLVS	BBBELBAAABAABB
L	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.0	Hu_IGLV2-14*02	87.5	L2	8	L2-8-1	12	YEGSRRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.0	Hu_IGLV2-14*02	0.0	L3	8	L3-8-*	-1	SSYAGSVV	BBBBLBBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.0	Hu_IGLV2-14*02	100.0	L4	6	L4-6-2	20	KSGNTA	BBEABB
M	heavy	Homo.sapiens	Hu_IGHV1-2*02	90.4	Hu_IGHV1-2*02	76.9	H1	13	H1-13-1	8	KTSGYTFTAYYLH	BBBLBBAAABBBB
M	heavy	Homo.sapiens	Hu_IGHV1-2*02	90.4	Hu_IGHV1-2*02	80.0	H2	10	H2-10-1	12	WINPNTGDTN	BBBAAALBBB
M	heavy	Homo.sapiens	Hu_IGHV1-2*02	90.4	Hu_IGHV1-2*02	50.0	H3	26	H3-26-*	-1	AKDltlmyvfdsgwaRGAHDYYGMDV
M	heavy	Homo.sapiens	Hu_IGHV1-2*02	90.4	Hu_IGHV1-2*02	87.5	H4	8	H4-8-1	6	RDTSITTA	BBAAALBB
N	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.0	Hu_IGLV2-14*02	71.4	L1	14	L1-14-*	-1	TGTNSDVGTfDLVS	BBBBLBABABAABB
N	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.0	Hu_IGLV2-14*02	87.5	L2	8	L2-8-1	12	YEGSRRPS	BLLABBBB
N	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.0	Hu_IGLV2-14*02	0.0	L3	8	L3-8-*	-1	SSYAGSVV	BBBBLBBB
N	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.0	Hu_IGLV2-14*02	100.0	L4	6	L4-6-2	21	KSGNTA	BBEABB
O	heavy	Homo.sapiens	Hu_IGHV1-2*02	90.4	Hu_IGHV1-2*02	76.9	H1	13	H1-13-1	8	KTSGYTFTAYYLH	BBBLBBAAABBBB
O	heavy	Homo.sapiens	Hu_IGHV1-2*02	90.4	Hu_IGHV1-2*02	80.0	H2	10	H2-10-1	12	WINPNTGDTN	BBBAAALBBB
O	heavy	Homo.sapiens	Hu_IGHV1-2*02	90.4	Hu_IGHV1-2*02	50.0	H3	26	H3-26-*	-1	AKDltlmyvfdsgwaRGAHDYYGMDV
O	heavy	Homo.sapiens	Hu_IGHV1-2*02	90.4	Hu_IGHV1-2*02	87.5	H4	8	H4-8-1	6	RDTSITTA	BBAAALBB
P	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.0	Hu_IGLV2-14*02	71.4	L1	14	L1-14-*	-1	TGTNSDVGTfDLVS	BBAABAAAABAABB
P	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.0	Hu_IGLV2-14*02	87.5	L2	8	L2-8-1	12	YEGSRRPS	BLLABBBB
P	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.0	Hu_IGLV2-14*02	0.0	L3	8	L3-8-*	-1	SSYAGSVV	BBBBLBBB
P	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.0	Hu_IGLV2-14*02	100.0	L4	6	L4-6-*	-1	KSGNTA	BBBLBB
Q	heavy	Homo.sapiens	Hu_IGHV1-2*02	90.4	Hu_IGHV1-2*02	76.9	H1	13	H1-13-1	8	KTSGYTFTAYYLH	BBBLBBAAABBBB
Q	heavy	Homo.sapiens	Hu_IGHV1-2*02	90.4	Hu_IGHV1-2*02	80.0	H2	10	H2-10-1	12	WINPNTGDTN	BBBAAALBBB
Q	heavy	Homo.sapiens	Hu_IGHV1-2*02	90.4	Hu_IGHV1-2*02	50.0	H3	26	H3-26-*	-1	AKDltlmyvfdsgwaRGAHDYYGMDV
Q	heavy	Homo.sapiens	Hu_IGHV1-2*02	90.4	Hu_IGHV1-2*02	87.5	H4	8	H4-8-1	6	RDTSITTA	BBAAALBB
R	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.0	Hu_IGLV2-14*02	71.4	L1	14	L1-14-*	-1	TGTNSDVGTfDLVS	BBBAABLAABAABB
R	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.0	Hu_IGLV2-14*02	87.5	L2	8	L2-8-1	12	YEGSRRPS	BLLABBBB
R	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.0	Hu_IGLV2-14*02	0.0	L3	8	L3-8-*	-1	SSYAGSVV	BBBBLBBB
R	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.0	Hu_IGLV2-14*02	100.0	L4	6	L4-6-*	-1	KSGNTA	AEAABA

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