PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5VXR

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV3S1*01	98.6	Mo_IGHV3S1*01	92.3	H1	13	H1-13-*	-1	SVTGDSITSGYWN	BBBLBBAABEBBB
H	heavy	Mus.musculus	Mo_IGHV3S1*01	98.6	Mo_IGHV3S1*01	88.9	H2	9	H2-9-1	10	YISYSGDTY	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV3S1*01	98.6	Mo_IGHV3S1*01	100.0	H3	13	H3-13-*	-1	ARMGYGSQPGFGS	BBBBBAABABBAB
H	heavy	Mus.musculus	Mo_IGHV3S1*01	98.6	Mo_IGHV3S1*01	100.0	H4	8	H4-8-1	10	RDTSKNQY	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	86.7	L1	15	L1-15-1	6	RASESVDSYgksfLH	BBABBABBLLBBBBB
L	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	100.0	L2	8	L2-8-1	7	YLASNLES	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	85.7	L3	9	L3-9-cis7-1	14	QHNNEDPWT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	100.0	L4	6	L4-6-1	6	GSRTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022