PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5VN8

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
F	heavy	Homo.sapiens	Hu_IGHV1-3*04	87.7	Hu_IGHV1-3*04	46.2	H1	13	H1-13-*	-1	QASGYRFSNFVIH	BBAABBAAABBBB
F	heavy	Homo.sapiens	Hu_IGHV1-3*04	87.7	Hu_IGHV1-3*04	60.0	H2	10	H2-10-1	9	WINPYNGNKE	BBBAAALBBB
F	heavy	Homo.sapiens	Hu_IGHV1-3*04	87.7	Hu_IGHV1-3*04	100.0	H3	20	H3-20-*	-1	ARvgpyswDDSPQDNYYMDV
F	heavy	Homo.sapiens	Hu_IGHV1-3*04	87.7	Hu_IGHV1-3*04	75.0	H4	8	H4-8-1	9	ADTSANTA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV1-3*04	87.7	Hu_IGHV1-3*04	46.2	H1	13	H1-13-*	-1	QASGYRFSNFVIH	BBAABBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-3*04	87.7	Hu_IGHV1-3*04	60.0	H2	10	H2-10-1	9	WINPYNGNKE	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-3*04	87.7	Hu_IGHV1-3*04	100.0	H3	20	H3-20-*	-1	ARvgpyswDDSPQDNYYMDV
H	heavy	Homo.sapiens	Hu_IGHV1-3*04	87.7	Hu_IGHV1-3*04	75.0	H4	8	H4-8-1	9	ADTSANTA	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV1-3*04	87.7	Hu_IGHV1-3*04	46.2	H1	13	H1-13-*	-1	QASGYRFSNFVIH	BBAABBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV1-3*04	87.7	Hu_IGHV1-3*04	60.0	H2	10	H2-10-1	9	WINPYNGNKE	BBBAAALBBB
I	heavy	Homo.sapiens	Hu_IGHV1-3*04	87.7	Hu_IGHV1-3*04	100.0	H3	20	H3-20-*	-1	ARvgpyswDDSPQDNYYMDV
I	heavy	Homo.sapiens	Hu_IGHV1-3*04	87.7	Hu_IGHV1-3*04	75.0	H4	8	H4-8-1	9	ADTSANTA	BBAAALBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	41.7	L1	12	L1-12-*	-1	RSSHSIRSrRVA	BBABBBAALBBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	50.0	L2	8	L2-8-*	-1	HGVSNRAS	BEAABBBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	57.1	L3	9	L3-9-*	-1	QVYGASSYT	BABBBABBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	100.0	L4	6	L4-6-*	-1	GSGTDF	EBEABB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	41.7	L1	12	L1-12-*	-1	RSSHSIRSrRVA	BBABBBAALBBB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	50.0	L2	8	L2-8-*	-1	HGVSNRAS	BEAABBBB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	57.1	L3	9	L3-9-*	-1	QVYGASSYT	BABBBABBB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	100.0	L4	6	L4-6-*	-1	GSGTDF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	41.7	L1	12	L1-12-*	-1	RSSHSIRSrRVA	BBABBBAALBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	50.0	L2	8	L2-8-*	-1	HGVSNRAS	BEAABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	57.1	L3	9	L3-9-*	-1	QVYGASSYT	BABBBABBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	100.0	L4	6	L4-6-*	-1	GSGTDF	EBEABB

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