PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5VM0

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Lama.glama	La_IGHV1S1*01_VHH	86.3	La_IGHV1S1*01_VHH	53.8	H1	13	H1-13-*	-1	AASGRTYTPYAMA	BBBEBBBAABBBB
A	heavy	Lama.glama	La_IGHV1S1*01_VHH	86.3	La_IGHV1S1*01_VHH	30.0	H2	10	H2-10-*	-1	GIGGIDGTAA	BBBEAALBBB
A	heavy	Lama.glama	La_IGHV1S1*01_VHH	86.3	La_IGHV1S1*01_VHH	50.0	H3	17	H3-17-*	-1	ATRASMQvltSPRVYPI
A	heavy	Lama.glama	La_IGHV1S1*01_VHH	86.3	La_IGHV1S1*01_VHH	75.0	H4	8	H4-8-1	6	RDSAKKTV	BBAAALBB
B	heavy	Lama.glama	La_IGHV1S1*01_VHH	86.3	La_IGHV1S1*01_VHH	53.8	H1	13	H1-13-*	-1	AASGRTYTPYAMA	BBBEBBBAABBBB
B	heavy	Lama.glama	La_IGHV1S1*01_VHH	86.3	La_IGHV1S1*01_VHH	30.0	H2	10	H2-10-*	-1	GIGGIDGTAA	BBBEAALBBB
B	heavy	Lama.glama	La_IGHV1S1*01_VHH	86.3	La_IGHV1S1*01_VHH	50.0	H3	17	H3-17-*	-1	ATRASMQvltSPRVYPI
B	heavy	Lama.glama	La_IGHV1S1*01_VHH	86.3	La_IGHV1S1*01_VHH	75.0	H4	8	H4-8-1	6	RDSAKKTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022