PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5VIG

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-23*05	94.5	Hu_IGHV3-23*05	76.9	H1	13	H1-13-1	14	AASGFTFKNYAMA	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*05	94.5	Hu_IGHV3-23*05	50.0	H2	10	H2-10-*	-1	LLYNSEESTY	BBAABAAABB
A	heavy	Homo.sapiens	Hu_IGHV3-23*05	94.5	Hu_IGHV3-23*05	0.0	H3	13	H3-13-*	-1	VRDRSNGWSSINL	BBBABAELBBBAB
A	heavy	Homo.sapiens	Hu_IGHV3-23*05	94.5	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	81.8	L1	11	L1-11-1	11	RASQTISGWLA	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	75.0	L2	8	L2-8-1	8	YQASRLES	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	42.9	L3	8	L3-8-1	7	QQYSTFWT	BBAABEBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	13	GSGTEF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-23*05	94.5	Hu_IGHV3-23*05	76.9	H1	13	H1-13-1	14	AASGFTFKNYAMA	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*05	94.5	Hu_IGHV3-23*05	50.0	H2	10	H2-10-*	-1	LLYNSEESTY	BBAABAAABB
H	heavy	Homo.sapiens	Hu_IGHV3-23*05	94.5	Hu_IGHV3-23*05	0.0	H3	13	H3-13-*	-1	VRDRSNGWSSINL	BBBABAELBBBAB
H	heavy	Homo.sapiens	Hu_IGHV3-23*05	94.5	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	81.8	L1	11	L1-11-1	11	RASQTISGWLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	75.0	L2	8	L2-8-1	8	YQASRLES	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	42.9	L3	8	L3-8-1	7	QQYSTFWT	BBAABEBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	13	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022