PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5VF6

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Gallus.gallus	Ch_IGHV1S1*01	91.7	Ch_IGHV1S1*01	92.3	H1	13	H1-13-1	11	KASGFTFSSYDMG	BBBLBBAAABBBB
A	heavy	Gallus.gallus	Ch_IGHV1S1*01	91.7	Ch_IGHV1S1*01	50.0	H2	10	H2-10-2	9	GITDNGRYAS	BBBAALABBB
A	heavy	Gallus.gallus	Ch_IGHV1S1*01	91.7	Ch_IGHV1S1*01	40.0	H3	15	H3-15-*	-1	ARDDGSgWTGNSIDA
A	heavy	Gallus.gallus	Ch_IGHV1S1*01	91.7	Ch_IGHV1S1*01	87.5	H4	8	H4-8-1	8	RDNGQSSV	BBAAALBB
A	lambda	Gallus.gallus	Ch_IGLV1S1*01	90.9	CDRLenMismatch	-1.0	L1	10	L1-10-*	-1	SGSSSAYGYG	BBABAABBBB
A	lambda	Gallus.gallus	Ch_IGLV1S1*01	90.9	Ch_IGLV1S1*01	62.5	L2	8	L2-8-*	-1	YNNNKRPS	BLLABBBA
A	lambda	Gallus.gallus	Ch_IGLV1S1*01	90.9	Ch_IGLV1S1*01	55.6	L3	10	L3-10-*	-1	GSEDSSTDAI	BBBBAABABB
A	lambda	Gallus.gallus	Ch_IGLV1S1*01	90.9	Ch_IGLV1S1*01	83.3	L4	6	L4-6-2	5	KSGSTG	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022