PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5UTZ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV4-31*02	98.6	Hu_IGHV4-31*02	100.0	H1	15	H1-15-*	-1	TVSGGSISSggYYWS	BBBLBBBABAABBBB
B	heavy	Homo.sapiens	Hu_IGHV4-31*02	98.6	Hu_IGHV4-31*02	100.0	H2	9	H2-9-1	13	YIYYSGSTY	BBBAALBBB
B	heavy	Homo.sapiens	Hu_IGHV4-31*02	98.6	Hu_IGHV4-31*02	100.0	H3	13	H3-13-*	-1	ARTPTVTGDWFDP	BBBBBEAEBBBBb
B	heavy	Homo.sapiens	Hu_IGHV4-31*02	98.6	Hu_IGHV4-31*02	100.0	H4	8	H4-8-1	7	VDTSKNQF	BBAAALBB
C	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L1	13	L1-13-2	6	TRSSGSIASNYVQ	BBABEBAAABBBB
C	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L2	8	L2-8-1	14	YEDNQRPS	BLEABBBB
C	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L3	9	L3-9-3	25	QSYDSSNVV	BBBBAABBB
C	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L4	8	L4-8-1	6	idSSSNSA	BBAAALBB
F	heavy	Homo.sapiens	Hu_IGHV4-31*02	98.6	Hu_IGHV4-31*02	100.0	H1	15	H1-15-*	-1	TVSGGSISSggYYWS	BBBLBBBABAABBBB
F	heavy	Homo.sapiens	Hu_IGHV4-31*02	98.6	Hu_IGHV4-31*02	100.0	H2	9	H2-9-1	13	YIYYSGSTY	BBBAALBBB
F	heavy	Homo.sapiens	Hu_IGHV4-31*02	98.6	Hu_IGHV4-31*02	100.0	H3	13	H3-13-*	-1	ARTPTVTGDWFDP	BBBBBEAEBBBBb
F	heavy	Homo.sapiens	Hu_IGHV4-31*02	98.6	Hu_IGHV4-31*02	100.0	H4	8	H4-8-1	7	VDTSKNQF	BBAAALBB
G	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L1	13	L1-13-2	7	TRSSGSIASNYVQ	BBABEBAAABBBB
G	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L2	8	L2-8-1	14	YEDNQRPS	BLEABBBB
G	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L3	9	L3-9-3	25	QSYDSSNVV	BBBBAABBB
G	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L4	8	L4-8-1	6	idSSSNSA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV4-31*02	98.6	Hu_IGHV4-31*02	100.0	H1	15	H1-15-*	-1	TVSGGSISSggYYWS	BBBLBBBABAABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-31*02	98.6	Hu_IGHV4-31*02	100.0	H2	9	H2-9-1	13	YIYYSGSTY	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-31*02	98.6	Hu_IGHV4-31*02	100.0	H3	13	H3-13-*	-1	ARTPTVTGDWFDP	BBBBBEAEBBBBb
H	heavy	Homo.sapiens	Hu_IGHV4-31*02	98.6	Hu_IGHV4-31*02	100.0	H4	8	H4-8-1	7	VDTSKNQF	BBAAALBB
J	heavy	Homo.sapiens	Hu_IGHV4-31*02	98.6	Hu_IGHV4-31*02	100.0	H1	15	H1-15-*	-1	TVSGGSISSggYYWS	BBBLBBBABAABBBB
J	heavy	Homo.sapiens	Hu_IGHV4-31*02	98.6	Hu_IGHV4-31*02	100.0	H2	9	H2-9-1	13	YIYYSGSTY	BBBAALBBB
J	heavy	Homo.sapiens	Hu_IGHV4-31*02	98.6	Hu_IGHV4-31*02	100.0	H3	13	H3-13-*	-1	ARTPTVTGDWFDP	BBBBBEAEBBBBb
J	heavy	Homo.sapiens	Hu_IGHV4-31*02	98.6	Hu_IGHV4-31*02	100.0	H4	8	H4-8-1	7	VDTSKNQF	BBAAALBB
K	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L1	13	L1-13-2	6	TRSSGSIASNYVQ	BBABEBAAABBBB
K	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L2	8	L2-8-1	14	YEDNQRPS	BLEABBBB
K	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L3	9	L3-9-3	25	QSYDSSNVV	BBBBAABBB
K	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L4	8	L4-8-1	6	idSSSNSA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L1	13	L1-13-2	6	TRSSGSIASNYVQ	BBABEBAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L2	8	L2-8-1	14	YEDNQRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L3	9	L3-9-3	25	QSYDSSNVV	BBBBAABBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L4	8	L4-8-1	6	idSSSNSA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022