PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5USL

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV3-7*01	98.6	Hu_IGHV3-7*01	76.9	H1	13	H1-13-1	13	VVSGFTFSNYWMS	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-7*01	98.6	Hu_IGHV3-7*01	90.0	H2	10	H2-10-2	8	NIKQDGSKKY	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-7*01	98.6	Hu_IGHV3-7*01	50.0	H3	17	H3-17-*	-1	ATLNLELAVdaiSEALK
B	heavy	Homo.sapiens	Hu_IGHV3-7*01	98.6	Hu_IGHV3-7*01	100.0	H4	8	H4-8-1	11	RDNAKNSL	BBAAALBB
C	lambda	Homo.sapiens	Hu_IGLV3-25*02	95.5	Hu_IGLV3-25*02	90.9	L1	11	L1-11-4	14	SGDALPKQFAY	BBAAAAABBBB
C	lambda	Homo.sapiens	Hu_IGLV3-25*02	95.5	Hu_IGLV3-25*02	100.0	L2	8	L2-8-1	8	YKDSERPS	BLLABBBB
C	lambda	Homo.sapiens	Hu_IGLV3-25*02	95.5	Hu_IGLV3-25*02	77.8	L3	11	L3-11-2	13	QSVDNSGTYEV	BBBBAALABBB
C	lambda	Homo.sapiens	Hu_IGLV3-25*02	95.5	Hu_IGLV3-25*02	100.0	L4	6	L4-6-2	13	SSGTTV	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-7*01	98.6	Hu_IGHV3-7*01	76.9	H1	13	H1-13-1	14	VVSGFTFSNYWMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-7*01	98.6	Hu_IGHV3-7*01	90.0	H2	10	H2-10-2	12	NIKQDGSKKY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-7*01	98.6	Hu_IGHV3-7*01	50.0	H3	17	H3-17-*	-1	ATLNLELAVdaiSEALK
H	heavy	Homo.sapiens	Hu_IGHV3-7*01	98.6	Hu_IGHV3-7*01	100.0	H4	8	H4-8-1	12	RDNAKNSL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	95.5	Hu_IGLV3-25*02	90.9	L1	11	L1-11-4	15	SGDALPKQFAY	BBAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	95.5	Hu_IGLV3-25*02	100.0	L2	8	L2-8-1	10	YKDSERPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	95.5	Hu_IGLV3-25*02	77.8	L3	11	L3-11-2	15	QSVDNSGTYEV	BBBBAALABBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	95.5	Hu_IGLV3-25*02	100.0	L4	6	L4-6-2	10	SSGTTV	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022