PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5USH

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Homo.sapiens	Hu_IGHV4-39*01	100.0	Hu_IGHV4-39*01	73.3	H1	15	H1-15-2	15	TISGDSISsnNYYWG	BBBLBBABBAABBBB
D	heavy	Homo.sapiens	Hu_IGHV4-39*01	100.0	Hu_IGHV4-39*01	100.0	H2	9	H2-9-1	12	SIYYSGSTY	BBBAALBBB
D	heavy	Homo.sapiens	Hu_IGHV4-39*01	100.0	Hu_IGHV4-39*01	100.0	H3	15	H3-15-*	-1	ARHRRVLlWFGEFQL
D	heavy	Homo.sapiens	Hu_IGHV4-39*01	100.0	Hu_IGHV4-39*01	100.0	H4	8	H4-8-1	12	VDTSKNQF	BBAAALBB
E	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	100.0	L1	14	L1-14-3	7	TGSSSNIGAgYDVH	BBBAAAAAALBBBB
E	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	87.5	L2	8	L2-8-1	9	YGNINRPS	BLLABBBB
E	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	100.0	L3	11	L3-11-1	16	QSYDSSLSGAL	BBBBAAALBBB
E	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	100.0	L4	6	L4-6-2	10	KSGTSA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	100.0	Hu_IGHV4-39*01	73.3	H1	15	H1-15-2	16	TISGDSISsnNYYWG	BBBLBBABBAABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	100.0	Hu_IGHV4-39*01	100.0	H2	9	H2-9-1	14	SIYYSGSTY	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	100.0	Hu_IGHV4-39*01	100.0	H3	15	H3-15-*	-1	ARHRRVLlWFGEFQL
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	100.0	Hu_IGHV4-39*01	100.0	H4	8	H4-8-1	13	VDTSKNQF	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	100.0	L1	14	L1-14-3	8	TGSSSNIGAgYDVH	BBBAAAAAALBBBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	87.5	L2	8	L2-8-1	6	YGNINRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	100.0	L3	11	L3-11-1	14	QSYDSSLSGAL	BBBBAAALEBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	100.0	L4	6	L4-6-2	13	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022