PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5UKO

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	95.9	CDRLenMismatch	-1.0	H1	14	H1-14-2	11	AVSGGSIgDDYYWN	BBBLEBAABBBBBB
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	95.9	Ma_IGHV4-2*01	50.0	H2	10	H2-10-1	10	SIYGSFGGTN	BBBAAALBBB
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	95.9	Ma_IGHV4-2*01	100.0	H3	17	H3-17-*	-1	ARGSYNIVvlfGYYFDY
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	95.9	Ma_IGHV4-2*01	87.5	H4	8	H4-8-*	-1	MDTSKNQF	BBABLLBB
L	lambda	Macaca.mulatta	Ma_IGLV2S9*01	95.6	Ma_IGLV2S9*01	64.3	L1	14	L1-14-2	10	SGTSSDIGAyNGVS	BBBAABAAABBABB
L	lambda	Macaca.mulatta	Ma_IGLV2S9*01	95.6	Ma_IGLV2S9*01	87.5	L2	8	L2-8-1	8	YEVSKRPS	BLLABBBB
L	lambda	Macaca.mulatta	Ma_IGLV2S9*01	95.6	Ma_IGLV2S9*01	77.8	L3	10	L3-10-*	-1	GSYRSGSTWV	BBBBBLLBBB
L	lambda	Macaca.mulatta	Ma_IGLV2S9*01	95.6	Ma_IGLV2S9*01	100.0	L4	6	L4-6-2	9	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022