PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5UEK

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Ca_IGHV1S32*01	53.8	H1	13	H1-13-1	9	AASGFNVSYYSIH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Ca_IGHV1S32*01	60.0	H2	10	H2-10-3	14	SIYPYSGSTS	BBBBLALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	100.0	H3	10	H3-10-2	16	ARGYGWALDY	BBBBEABBAB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	62.5	H4	8	H4-8-1	8	ADTSKNTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Ca_IGKV1-26*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BBABABAAABB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Ca_IGKV1-26*01	75.0	L2	8	L2-8-1	3	YSASSLYS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	28.6	L3	9	L3-9-3	16	QQDGWSLIT	BBBBAABBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-2	12	RSGTDF	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022