PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5UD9

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-OR15-8*02	76.7	None	-1.0	H1	14	H1-14-*	-1	TVSQDSrPSDHSWT	BBBLBABAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-OR15-8*02	76.7	None	-1.0	H2	9	H2-9-1	10	DIHYNGATT	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-OR15-8*02	76.7	Hu_IGHV4-OR15-8*02	100.0	H3	23	H3-23-*	-1	ARNAIRIYgvvalgewfHYGMDV
H	heavy	Homo.sapiens	Hu_IGHV4-OR15-8*02	76.7	Hu_IGHV4-OR15-8*02	37.5	H4	8	H4-8-*	-1	LDQSIPRF	BBAAAbBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	86.4	None	36.4	L1	11	L1-11-4	13	SGAPLTSRFTY	BEAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	86.4	None	37.5	L2	8	L2-8-*	-1	SRSSQrss
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	86.4	Hu_IGLV3-25*02	55.6	L3	11	L3-11-2	14	QSSDTSDSYKM	BBBBAALABBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	86.4	Hu_IGLV3-25*02	83.3	L4	6	L4-6-2	14	WSGTTV	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022