PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5TZT

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-3*04	97.3	Mo_IGHV1S29*01	100.0	H1	13	H1-13-1	10	KASGYTFTDYNMH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV1-3*04	97.3	Mo_IGHV1S29*01	90.0	H2	10	H2-10-1	10	DIYPYNGGTG	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-3*04	97.3	Hu_IGHV1-3*04	100.0	H3	10	H3-10-*	-1	ARGGWHAMDS	BBEBAABBAB
A	heavy	Homo.sapiens	Hu_IGHV1-3*04	97.3	Hu_IGHV1-3*04	100.0	H4	8	H4-8-1	10	RDTSASTA	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Mo_IGKV1-117*01	68.8	L1	16	L1-16-1	15	RSRQSIvhtnrYTYLA	BBABBABBAALBBBBB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	13	YKVSNRFS	BLEABBBB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	28.6	L3	9	L3-9-cis7-1	12	FQGSHVPYT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L4	6	L4-6-1	22	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-3*04	97.3	Mo_IGHV1S29*01	100.0	H1	13	H1-13-1	9	KASGYTFTDYNMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-3*04	97.3	Mo_IGHV1S29*01	90.0	H2	10	H2-10-1	10	DIYPYNGGTG	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-3*04	97.3	Hu_IGHV1-3*04	100.0	H3	10	H3-10-*	-1	ARGGWHAMDS	BBEBAABBAB
H	heavy	Homo.sapiens	Hu_IGHV1-3*04	97.3	Hu_IGHV1-3*04	100.0	H4	8	H4-8-1	10	RDTSASTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Mo_IGKV1-117*01	68.8	L1	16	L1-16-1	16	RSRQSIvhtnrYTYLA	BBABBABBAALBBBBB
L	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	14	YKVSNRFS	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	28.6	L3	9	L3-9-cis7-1	13	FQGSHVPYT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L4	6	L4-6-1	27	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022