PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5TSJ

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
1	heavy	Homo.sapiens	Hu_IGHV3-23*05	100.0	Hu_IGHV3-23*05	84.6	H1	13	H1-13-1	10	AASGFTFSTYMMS	BBBLBBAAABBBB
1	heavy	Homo.sapiens	Hu_IGHV3-23*05	100.0	Hu_IGHV3-23*05	60.0	H2	10	H2-10-2	8	SIEGSGSKTY	BBBAALABBB
1	heavy	Homo.sapiens	Hu_IGHV3-23*05	100.0	Hu_IGHV3-23*05	100.0	H3	11	H3-11-*	-1	AKRDSSFGFDY	BBbBAAABBAB
1	heavy	Homo.sapiens	Hu_IGHV3-23*05	100.0	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
2	heavy	Homo.sapiens	Hu_IGHV3-23*05	100.0	Hu_IGHV3-23*05	84.6	H1	13	H1-13-1	10	AASGFTFSTYMMS	BBBLBBAAABBBB
2	heavy	Homo.sapiens	Hu_IGHV3-23*05	100.0	Hu_IGHV3-23*05	60.0	H2	10	H2-10-2	8	SIEGSGSKTY	BBBAALABBB
2	heavy	Homo.sapiens	Hu_IGHV3-23*05	100.0	Hu_IGHV3-23*05	100.0	H3	11	H3-11-*	-1	AKRDSSFGFDY	BBbBAAABBAB
2	heavy	Homo.sapiens	Hu_IGHV3-23*05	100.0	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022