PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5TRU

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-30*03	97.3	Hu_IGHV3-30*03	92.3	H1	13	H1-13-1	16	AASGFTFSSYTMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*03	97.3	Hu_IGHV3-30*03	80.0	H2	10	H2-10-2	15	FISYDGNNKY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*03	97.3	Hu_IGHV3-30*03	100.0	H3	11	H3-11-1	21	ARTGWLGPFDY	BBBBAALBBAB
H	heavy	Homo.sapiens	Hu_IGHV3-30*03	97.3	Hu_IGHV3-30*03	100.0	H4	8	H4-8-1	11	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	91.7	L1	12	L1-12-*	-1	RASQSVgSSYLA	BBABBBEBLBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	8	YGAFSRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L3	9	L3-9-cis7-1	9	QQYGSSPWT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
h	heavy	Homo.sapiens	Hu_IGHV3-30*03	97.3	Hu_IGHV3-30*03	92.3	H1	13	H1-13-1	8	AASGFTFSSYTMH	BBBLBBAAABBBB
h	heavy	Homo.sapiens	Hu_IGHV3-30*03	97.3	Hu_IGHV3-30*03	80.0	H2	10	H2-10-2	9	FISYDGNNKY	BBBAALABBB
h	heavy	Homo.sapiens	Hu_IGHV3-30*03	97.3	Hu_IGHV3-30*03	100.0	H3	11	H3-11-1	23	ARTGWLGPFDY	BBBBAALBBAB
h	heavy	Homo.sapiens	Hu_IGHV3-30*03	97.3	Hu_IGHV3-30*03	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
l	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	91.7	L1	12	L1-12-2	9	RASQSVgSSYLA	BBABBBBLLBBB
l	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	9	YGAFSRAT	BLLABBBB
l	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L3	9	L3-9-cis7-1	7	QQYGSSPWT	BBAABBbBB
l	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022