PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5TKK

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV3-6*01	95.8	Mo_IGHV3-6*01	85.7	H1	14	H1-14-1	8	SVTGYSITrAYYWN	BBBLBBAAABEBBB
H	heavy	Mus.musculus	Mo_IGHV3-6*01	95.8	Mo_IGHV3-6*01	55.6	H2	9	H2-9-1	9	YILYDGRSD	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV3-6*01	95.8	Mo_IGHV3-6*01	50.0	H3	9	H3-9-*	-1	TREGNYRAY	BBBELLBBB
H	heavy	Mus.musculus	Mo_IGHV3-6*01	95.8	Mo_IGHV3-6*01	100.0	H4	8	H4-8-1	9	RDTSKNQF	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV6-13*01	97.1	Mo_IGKV6-13*01	81.8	L1	11	L1-11-1	13	KASQNVGSDVA	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV6-13*01	97.1	Mo_IGKV6-13*01	100.0	L2	8	L2-8-1	9	YSASNRYT	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV6-13*01	97.1	Mo_IGKV6-13*01	100.0	L3	9	L3-9-cis7-1	10	QQYSSYPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV6-13*01	97.1	Mo_IGKV6-13*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022