PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5T5F

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-72*01	94.5	Mo_IGHV1-72*01	92.3	H1	13	H1-13-1	12	KASGYTFISYWMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-72*01	94.5	Mo_IGHV1-72*01	40.0	H2	10	H2-10-1	19	RIAPDTGIIY	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-72*01	94.5	Mo_IGHV1-72*01	100.0	H3	15	H3-15-*	-1	ARYLKYdGSTYRFDY
H	heavy	Mus.musculus	Mo_IGHV1-72*01	94.5	Mo_IGHV1-72*01	87.5	H4	8	H4-8-1	14	VDTPSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV2-137*01	98.6	Mo_IGKV2-137*01	93.8	L1	16	L1-16-1	13	RSSKSLlhsngNTYLF	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV2-137*01	98.6	Mo_IGKV2-137*01	100.0	L2	8	L2-8-1	12	YRMSNLAS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV2-137*01	98.6	Mo_IGKV2-137*01	100.0	L3	9	L3-9-cis7-1	5	MQHLEYPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV2-137*01	98.6	Mo_IGKV2-137*01	83.3	L4	6	L4-6-*	-1	GSGTSF	EALABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022