PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5T1D

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-81*01	84.9	Mo_IGHV1-81*01	84.6	H1	13	H1-13-*	-1	KASGYTFTDYVIS	BBBEBBBBLBBBB
H	heavy	Mus.musculus	Mo_IGHV1-81*01	84.9	Mo_IGHV1-81*01	90.0	H2	10	H2-10-1	21	EIYPESGNTY	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-81*01	84.9	Mo_IGHV1-81*01	50.0	H3	8	H3-8-*	-1	AEGYAMDF	BBEAAbAB
H	heavy	Mus.musculus	Mo_IGHV1-81*01	84.9	Mo_IGHV1-81*01	87.5	H4	8	H4-8-*	-1	ADKSSNTA	BBAAALAL
L	kappa	Mus.musculus	Mo_IGKV1-110*01	92.8	Mo_IGKV1-110*01	93.8	L1	16	L1-16-*	-1	RSSQSLlhsngNTYLH	BBABBABABaABBBBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	92.8	Mo_IGKV1-110*01	100.0	L2	8	L2-8-1	17	YKVSNRFS	BLLBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	92.8	Mo_IGKV1-110*01	85.7	L3	9	L3-9-cis7-*	-1	SQSIHVPRT	BBAABBbAE
L	kappa	Mus.musculus	Mo_IGKV1-110*01	92.8	Mo_IGKV1-110*01	100.0	L4	6	L4-6-1	17	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022