PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5OD8

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-69*06	98.6	Hu_IGHV1-69*06	76.9	H1	13	H1-13-*	-1	RASGGTFSNYVIS	BBBAAAAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*06	98.6	Hu_IGHV1-69*06	90.0	H2	10	H2-10-1	10	GIIPIFGTAH	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*06	98.6	Hu_IGHV1-69*06	100.0	H3	20	H3-20-*	-1	ARINTspiltgYYFPGVHDY
A	heavy	Homo.sapiens	Hu_IGHV1-69*06	98.6	Hu_IGHV1-69*06	87.5	H4	8	H4-8-1	10	ADASTSTA	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-12*01	98.5	Hu_IGKV1-12*01	90.9	L1	11	L1-11-1	6	RASQSISSWLA	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-12*01	98.5	Hu_IGKV1-12*01	87.5	L2	8	L2-8-1	4	YSASSLQS	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-12*01	98.5	Hu_IGKV1-12*01	100.0	L3	9	L3-9-cis7-1	11	QQANSFPFT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV1-12*01	98.5	Hu_IGKV1-12*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022