PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5OD0

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-38-2*02	76.7	Hu_IGHV4-38-2*02	57.1	H1	14	H1-14-2	15	TVSGFPMSeSYFWG	BBBLBBAABBBBBB
H	heavy	Homo.sapiens	Hu_IGHV4-38-2*02	76.7	Hu_IGHV4-38-2*02	55.6	H2	9	H2-9-1	14	SVIHTGTTY	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-38-2*02	76.7	Hu_IGHV4-38-2*02	50.0	H3	13	H3-13-*	-1	VRIRGGSSNWLDP	BBBBBEAALBBBb
H	heavy	Homo.sapiens	Hu_IGHV4-38-2*02	76.7	Hu_IGHV4-38-2*02	62.5	H4	8	H4-8-1	8	MDPSKNQV	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV1-51*01	85.3	Hu_IGLV1-51*01	38.5	L1	13	L1-13-*	-1	SGDDSILRSAFVS	BBBEAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-51*01	85.3	Hu_IGLV1-51*01	50.0	L2	8	L2-8-1	9	FDDRQRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-51*01	85.3	Hu_IGLV1-51*01	44.4	L3	11	L3-11-1	10	AAWNGRLSAFV	BBBBAAALBBB
L	lambda	Homo.sapiens	Hu_IGLV1-51*01	85.3	Hu_IGLV1-51*01	66.7	L4	6	L4-6-*	-1	NSGTTA	BALABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022