PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5OBF

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV14-2*01	89.0	Mo_IGHV14-2*01	76.9	H1	13	H1-13-*	-1	TGSGFNIKVYYVH	BBBLBBBAABBBB
H	heavy	Mus.musculus	Mo_IGHV14-2*01	89.0	Mo_IGHV14-2*01	80.0	H2	10	H2-10-1	9	RIDPENGETI	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV14-2*01	89.0	Mo_IGHV14-2*01	0.0	H3	5	H3-5-*	-1	VSSGY	BBLLB
H	heavy	Mus.musculus	Mo_IGHV14-2*01	89.0	Mo_IGHV14-2*01	87.5	H4	8	H4-8-1	5	VDTSSNTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV2-109*01	94.2	Mo_IGKV2-109*01	93.8	L1	16	L1-16-1	6	RSSKSLlhrngITYLY	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV2-109*01	94.2	Mo_IGKV2-109*01	100.0	L2	8	L2-8-1	11	YQMSNLAS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV2-109*01	94.2	Mo_IGKV2-109*01	85.7	L3	8	L3-8-1	14	AQNLELWT	BBAABEBB
L	kappa	Mus.musculus	Mo_IGKV2-109*01	94.2	Mo_IGKV2-109*01	100.0	L4	6	L4-6-*	-1	GSGTDF	EALABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022