PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5O4O

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L1	11	L1-11-1	8	RASQSISSYLN	BBABBAEABBB
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L2	8	L2-8-1	10	YAASSLQS	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L3	9	L3-9-2	11	QQSYSTPPT	BBAABABBB
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	15	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H1	13	H1-13-1	11	KASGYTFTGYYMH	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H2	10	H2-10-1	17	WINPNSGGTN	BBBAAALBBB
B	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H3	17	H3-17-*	-1	ARDHGSRhfwSYWGFDY
B	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H4	8	H4-8-1	9	RDTSISTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022