PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5O4G

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L1	11	L1-11-*	-1	RASQSISSYLN	BBABBBBLABB
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L2	8	L2-8-*	-1	YAASSLQS	BLEABBBB
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L3	9	L3-9-cis7-1	11	QQSYSTPPT	BBAABBbBB
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	18	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Hu_IGHV1-46*01	89.0	Hu_IGHV1-46*01	76.9	H1	13	H1-13-1	13	KASGYTFTAYYIN	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV1-46*01	89.0	Hu_IGHV1-46*01	50.0	H2	10	H2-10-3	14	RIYPGSGYTS	BBBBLALBBB
B	heavy	Homo.sapiens	Hu_IGHV1-46*01	89.0	Hu_IGHV1-46*01	100.0	H3	14	H3-14-*	-1	ARPPVYYDSAWFAY	BBBAABAABABBBL
B	heavy	Homo.sapiens	Hu_IGHV1-46*01	89.0	Hu_IGHV1-46*01	62.5	H4	8	H4-8-*	-1	ADESTSTA	BBAAALBA

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022