PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5O0W

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	91.8	Al_IGHV3S65*01_VHH	69.2	H1	13	H1-13-*	-1	AASETALTYYAIG	BBAABBAAABBBB
E	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	91.8	CDRLenMismatch	-1.0	H2	14	H2-14-*	-1	CISRinsgSGARTD
E	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	91.8	Al_IGHV3S65*01_VHH	0.0	H3	26	H3-26-*	-1	ALDTTDRYdsangryyctisSDTYDY
E	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	91.8	Al_IGHV3S65*01_VHH	87.5	H4	8	H4-8-1	10	RDDAKNTV	BBAAALBB
F	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	91.8	Al_IGHV3S65*01_VHH	69.2	H1	13	H1-13-*	-1	AASETALTYYAIG	BBAABBAAABBBB
F	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	91.8	CDRLenMismatch	-1.0	H2	14	H2-14-*	-1	CISRinsgSGARTD
F	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	91.8	Al_IGHV3S65*01_VHH	0.0	H3	26	H3-26-*	-1	ALDTTDRYdsangryyctisSDTYDY
F	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	91.8	Al_IGHV3S65*01_VHH	87.5	H4	8	H4-8-1	9	RDDAKNTV	BBAAALBB
G	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	91.8	Al_IGHV3S65*01_VHH	69.2	H1	13	H1-13-*	-1	AASETALTYYAIG	BBAABBAAABBBB
G	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	91.8	CDRLenMismatch	-1.0	H2	14	H2-14-*	-1	CISRinsgSGARTD
G	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	91.8	Al_IGHV3S65*01_VHH	0.0	H3	26	H3-26-*	-1	ALDTTDRYdsangryyctisSDTYDY
G	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	91.8	Al_IGHV3S65*01_VHH	87.5	H4	8	H4-8-1	10	RDDAKNTV	BBAAALBB
H	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	91.8	Al_IGHV3S65*01_VHH	69.2	H1	13	H1-13-*	-1	AASETALTYYAIG	BBAABBAAABBBB
H	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	91.8	CDRLenMismatch	-1.0	H2	14	H2-14-*	-1	CISRinsgSGARTD
H	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	91.8	Al_IGHV3S65*01_VHH	0.0	H3	26	H3-26-*	-1	ALDTTDRYdsangryyctisSDTYDY
H	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	91.8	Al_IGHV3S65*01_VHH	87.5	H4	8	H4-8-1	9	RDDAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022