PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5NST

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV1-8*01	85.3	Hu_IGKV1-8*01	63.6	L1	11	L1-11-1	5	RASQHINDSLA	BBABBAEABBB
A	kappa	Homo.sapiens	Hu_IGKV1-8*01	85.3	Hu_IGKV1-8*01	62.5	L2	8	L2-8-1	7	YGASNLHS	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV1-8*01	85.3	Hu_IGKV1-8*01	42.9	L3	9	L3-9-cis7-1	18	QQCNCFPPD	BBAABBbBB
A	kappa	Homo.sapiens	Hu_IGKV1-8*01	85.3	Hu_IGKV1-8*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Hu_IGHV4-4*02	89.0	Hu_IGHV4-4*02	42.9	H1	14	H1-14-2	14	AVSGDYVnTNRRWS	BBBLBBAABBBBBB
B	heavy	Homo.sapiens	Hu_IGHV4-4*02	89.0	Hu_IGHV4-4*02	55.6	H2	9	H2-9-1	6	EVHQSGRTN	BBBAALBBB
B	heavy	Homo.sapiens	Hu_IGHV4-4*02	89.0	Hu_IGHV4-4*02	100.0	H3	11	H3-11-*	-1	ARASSQYYVDV
B	heavy	Homo.sapiens	Hu_IGHV4-4*02	89.0	Hu_IGHV4-4*02	100.0	H4	8	H4-8-1	10	VDKSKNQF	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV1-8*01	85.3	Hu_IGKV1-8*01	63.6	L1	11	L1-11-1	15	RASQHINDSLA	BBABBAEABBB
C	kappa	Homo.sapiens	Hu_IGKV1-8*01	85.3	Hu_IGKV1-8*01	62.5	L2	8	L2-8-1	6	YGASNLHS	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV1-8*01	85.3	Hu_IGKV1-8*01	42.9	L3	9	L3-9-cis7-1	18	QQCNCFPPD	BBAABBbBB
C	kappa	Homo.sapiens	Hu_IGKV1-8*01	85.3	Hu_IGKV1-8*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB
D	heavy	Homo.sapiens	Hu_IGHV4-4*02	89.0	Hu_IGHV4-4*02	42.9	H1	14	H1-14-2	14	AVSGDYVnTNRRWS	BBBLBBABBBBBBB
D	heavy	Homo.sapiens	Hu_IGHV4-4*02	89.0	Hu_IGHV4-4*02	55.6	H2	9	H2-9-1	7	EVHQSGRTN	BBBAALBBB
D	heavy	Homo.sapiens	Hu_IGHV4-4*02	89.0	Hu_IGHV4-4*02	100.0	H3	11	H3-11-*	-1	ARASSQYYVDV
D	heavy	Homo.sapiens	Hu_IGHV4-4*02	89.0	Hu_IGHV4-4*02	100.0	H4	8	H4-8-1	10	VDKSKNQF	BBAAALBB

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