PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5NQW

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Lama.glama	La_IGHV1S6*01	90.4	La_IGHV1S6*01	61.5	H1	13	H1-13-1	9	AASGFTFGNYDMA	BBBLBBAAABBBB
C	heavy	Lama.glama	La_IGHV1S6*01	90.4	La_IGHV1S6*01	30.0	H2	10	H2-10-2	9	SIDTGGDITH	BBBAALABBB
C	heavy	Lama.glama	La_IGHV1S6*01	90.4	La_IGHV1S6*01	50.0	H3	15	H3-15-*	-1	ATDEEYAlGPNEFDY
C	heavy	Lama.glama	La_IGHV1S6*01	90.4	La_IGHV1S6*01	87.5	H4	8	H4-8-1	6	RDNAKNTL	BBAAALBB
D	heavy	Lama.glama	La_IGHV1S6*01	90.4	La_IGHV1S6*01	61.5	H1	13	H1-13-1	9	AASGFTFGNYDMA	BBBLBBAAABBBB
D	heavy	Lama.glama	La_IGHV1S6*01	90.4	La_IGHV1S6*01	30.0	H2	10	H2-10-2	9	SIDTGGDITH	BBBAALABBB
D	heavy	Lama.glama	La_IGHV1S6*01	90.4	La_IGHV1S6*01	50.0	H3	15	H3-15-*	-1	ATDEEYAlGPNEFDY
D	heavy	Lama.glama	La_IGHV1S6*01	90.4	La_IGHV1S6*01	87.5	H4	8	H4-8-1	6	RDNAKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022