PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5NM0

#CDRs = 4; #Clusters = 5.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-3	14	VVSGSAVSDYAMG	BBBEAAAAABBBB
A	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	55.6	H2	9	H2-9-1	11	AIYNSGRTN	BBBAALBBB
A	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	50.0	H3	12	H3-12-*	-1	NLLGATTMSNAV	BBBLAAABBLBB
A	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	75.0	H4	8	H4-8-1	6	KDNAKKTV	BBAAALBB
B	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-3	15	VVSGSAVSDYAMG	BBBEAAAAABBBB
B	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	55.6	H2	9	H2-9-*	-1	AIYNSGRTN	BBBBLLBBB
B	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	50.0	H3	12	H3-12-*	-1	NLLGATTMSNAV	BBBLAAABBLBB
B	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	75.0	H4	8	H4-8-1	7	KDNAKKTV	BBAAALBB
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-3	15	VVSGSAVSDYAMG	BBBEAAAAABBBB
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	55.6	H2	9	H2-9-1	9	AIYNSGRTN	BBBAALBBB
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	50.0	H3	12	H3-12-*	-1	NLLGATtmsnaV
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	75.0	H4	8	H4-8-1	7	KDNAKKTV	BBAAALBB
D	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-3	15	VVSGSAVSDYAMG	BBBEAAAAABBBB
D	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	55.6	H2	9	H2-9-1	10	AIYNSGRTN	BBBAALBBB
D	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	50.0	H3	12	H3-12-*	-1	NLLGATTMSNAV	BBBLAAABAABB
D	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	75.0	H4	8	H4-8-1	6	KDNAKKTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022