PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5NIV

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV13-84*01	88.2	Mo_IGKV13-84*01	72.7	L1	11	L1-11-2	5	KASGYILNRLA	BBABBALLBBB
A	kappa	Mus.musculus	Mo_IGKV13-84*01	88.2	Mo_IGKV13-84*01	100.0	L2	8	L2-8-1	6	SGATSLET	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV13-84*01	88.2	Mo_IGKV13-84*01	100.0	L3	9	L3-9-cis7-1	5	QQYWSTPWT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV13-84*01	88.2	Mo_IGKV13-84*01	100.0	L4	6	L4-6-1	9	GSGKDY	EBEABB
B	heavy	Mus.musculus	Mo_IGHV3-2*02	93.1	Mo_IGHV3-2*02	92.9	H1	14	H1-14-1	5	TVTGFSITsDYAWN	BBBLBBAAABEBBB
B	heavy	Mus.musculus	Mo_IGHV3-2*02	93.1	Mo_IGHV3-2*02	44.4	H2	9	H2-9-1	7	YINFDGGTT	BBBAALBBB
B	heavy	Mus.musculus	Mo_IGHV3-2*02	93.1	Mo_IGHV3-2*02	50.0	H3	12	H3-12-1	20	ATFYGAKGTLDY	BBBBAAALBBAB
B	heavy	Mus.musculus	Mo_IGHV3-2*02	93.1	Mo_IGHV3-2*02	100.0	H4	8	H4-8-1	8	RDTSKNQF	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022