PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5NHR

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-2*06	100.0	Hu_IGHV1-2*06	69.2	H1	13	H1-13-1	16	KASGYTFTSSYIN	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV1-2*06	100.0	Hu_IGHV1-2*06	60.0	H2	10	H2-10-1	17	TINPVSGSTS	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-2*06	100.0	Hu_IGHV1-2*06	100.0	H3	8	H3-8-2	7	ARGGWFDY	BBEAALAB
A	heavy	Homo.sapiens	Hu_IGHV1-2*06	100.0	Hu_IGHV1-2*06	100.0	H4	8	H4-8-1	13	RDTSISTA	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV2-14*02	100.0	Hu_IGLV2-14*02	85.7	L1	14	L1-14-2	14	TGTSSDVGSyNYVN	BBBAAAAAABBABB
B	lambda	Homo.sapiens	Hu_IGLV2-14*02	100.0	Hu_IGLV2-14*02	75.0	L2	8	L2-8-1	11	YGVSKRPS	BLLABBBB
B	lambda	Homo.sapiens	Hu_IGLV2-14*02	100.0	Hu_IGLV2-14*02	11.1	L3	11	L3-11-*	-1	GTFAGGSYYGV	BBBBEEABBBB
B	lambda	Homo.sapiens	Hu_IGLV2-14*02	100.0	Hu_IGLV2-14*02	100.0	L4	6	L4-6-2	10	KSGNTA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-2*06	100.0	Hu_IGHV1-2*06	69.2	H1	13	H1-13-1	16	KASGYTFTSSYIN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*06	100.0	Hu_IGHV1-2*06	60.0	H2	10	H2-10-1	17	TINPVSGSTS	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*06	100.0	Hu_IGHV1-2*06	100.0	H3	8	H3-8-2	7	ARGGWFDY	BBEAALAB
H	heavy	Homo.sapiens	Hu_IGHV1-2*06	100.0	Hu_IGHV1-2*06	100.0	H4	8	H4-8-1	13	RDTSISTA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*02	100.0	Hu_IGLV2-14*02	85.7	L1	14	L1-14-2	15	TGTSSDVGSyNYVN	BBBAAAAAABBABB
L	lambda	Homo.sapiens	Hu_IGLV2-14*02	100.0	Hu_IGLV2-14*02	75.0	L2	8	L2-8-1	11	YGVSKRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*02	100.0	Hu_IGLV2-14*02	11.1	L3	11	L3-11-*	-1	GTFAGGSYYGV	BBBBEEABBBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*02	100.0	Hu_IGLV2-14*02	100.0	L4	6	L4-6-2	10	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022