PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5NBD

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Lama.glama	Al_IGHV3S42*01	93.2	Al_IGHV3S42*01	100.0	H1	13	H1-13-1	17	AASGFTFSSYAMS	BBBLBBAAABBBB
C	heavy	Lama.glama	Al_IGHV3S42*01	93.2	Al_IGHV3S42*01	90.0	H2	10	H2-10-2	22	AITSGGGSTS	BBBAALABBB
C	heavy	Lama.glama	Al_IGHV3S42*01	93.2	Al_IGHV3S42*01	0.0	H3	16	H3-16-*	-1	AKGYVVDflDLAEYDS
C	heavy	Lama.glama	Al_IGHV3S42*01	93.2	Al_IGHV3S42*01	100.0	H4	8	H4-8-1	18	RDNAKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022