PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5MVZ

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV5-51*01	98.6	Hu_IGHV5-51*01	92.3	H1	13	H1-13-1	8	KGSGYTFTSYWIG	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV5-51*01	98.6	Hu_IGHV5-51*01	100.0	H2	10	H2-10-*	-1	IIYPGDSDTR	BBBAABABBB
A	heavy	Homo.sapiens	Hu_IGHV5-51*01	98.6	Hu_IGHV5-51*01	100.0	H3	11	H3-11-1	15	ARFVSLDAFDI	BBBBAALBBAB
A	heavy	Homo.sapiens	Hu_IGHV5-51*01	98.6	Hu_IGHV5-51*01	100.0	H4	8	H4-8-1	8	ADKSISTA	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L1	11	L1-11-*	-1	RASQSVSSYLA	BBABBBBABBB
B	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L2	8	L2-8-1	5	YDASNRAT	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	85.7	L3	9	L3-9-4	25	QQRSNWLWT	BBBBEABBB
B	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	98.6	Hu_IGHV5-51*01	92.3	H1	13	H1-13-1	9	KGSGYTFTSYWIG	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	98.6	Hu_IGHV5-51*01	100.0	H2	10	H2-10-1	15	IIYPGDSDTR	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	98.6	Hu_IGHV5-51*01	100.0	H3	11	H3-11-1	14	ARFVSLDAFDI	BBBBAALBBAB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	98.6	Hu_IGHV5-51*01	100.0	H4	8	H4-8-1	6	ADKSISTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L1	11	L1-11-*	-1	RASQSVSSYLA	BBABBBBABBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L2	8	L2-8-1	7	YDASNRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	85.7	L3	9	L3-9-4	26	QQRSNWLWT	BBBBEABBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022