PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5MV3

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100.0	H1	13	H1-13-1	18	AASGFTFSDAWMD	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	9	EIRNKvnNHATN	BBBBAAALLBBB
A	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	50.0	H3	7	H3-7-*	-1	TGLTFDY	BBLEAAB
A	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	75.0	H4	8	H4-8-1	10	RDDSRSVV	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	10	RASESVDNYgissMN	BBABBABBLLBBBBB
B	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	11	YAASKQGS	BLEABBBB
B	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	85.7	L3	9	L3-9-cis7-1	11	QQSKGVPYT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB
C	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100.0	H1	13	H1-13-1	17	AASGFTFSDAWMD	BBBLBBAAABBBB
C	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	10	EIRNKvnNHATN	BBBBAAALLBBB
C	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	50.0	H3	7	H3-7-*	-1	TGLTFDY	BBLEAAB
C	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	75.0	H4	8	H4-8-1	10	RDDSRSVV	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	10	RASESVDNYgissMN	BBABBABBLLBBBBB
D	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	14	YAASKQGS	BLEABBBB
D	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	85.7	L3	9	L3-9-cis7-1	12	QQSKGVPYT	BBAABBbBB
D	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
F	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100.0	H1	13	H1-13-1	16	AASGFTFSDAWMD	BBBLBBAAABBBB
F	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	11	EIRNKvnNHATN	BBBBAAALLBBB
F	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	50.0	H3	7	H3-7-*	-1	TGLTFDY	BBLEAAB
F	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	75.0	H4	8	H4-8-1	9	RDDSRSVV	BBAAALBB
G	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	10	RASESVDNYgissMN	BBABBABBLLBBBBB
G	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	17	YAASKQGS	BLEABBBB
G	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	85.7	L3	9	L3-9-cis7-1	15	QQSKGVPYT	BBAABBbBB
G	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
I	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100.0	H1	13	H1-13-1	15	AASGFTFSDAWMD	BBBLBBAAABBBB
I	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	8	EIRNKvnNHATN	BBBBAAALLBBB
I	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	50.0	H3	7	H3-7-*	-1	TGLTFDY	BBLEAAB
I	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	75.0	H4	8	H4-8-1	10	RDDSRSVV	BBAAALBB
J	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	12	RASESVDNYgissMN	BBABBABBLLBBBBB
J	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	7	YAASKQGS	BLLABBBB
J	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	85.7	L3	9	L3-9-cis7-1	9	QQSKGVPYT	BBAABBbBB
J	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB
L	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100.0	H1	13	H1-13-1	18	AASGFTFSDAWMD	BBBLBBAAABBBB
L	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	11	EIRNKvnNHATN	BBBBAAALLBBB
L	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	50.0	H3	7	H3-7-*	-1	TGLTFDY	BBLEAAB
L	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	75.0	H4	8	H4-8-1	10	RDDSRSVV	BBAAALBB
M	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	10	RASESVDNYgissMN	BBABBABBLLBBBBB
M	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	12	YAASKQGS	BLEABBBB
M	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	85.7	L3	9	L3-9-cis7-1	8	QQSKGVPYT	BBAABBbBB
M	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
O	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100.0	H1	13	H1-13-1	18	AASGFTFSDAWMD	BBBLBBAAABBBB
O	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	11	EIRNKvnNHATN	BBBBAAALLBBB
O	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	50.0	H3	7	H3-7-*	-1	TGLTFDY	BBLEAAB
O	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	75.0	H4	8	H4-8-1	9	RDDSRSVV	BBAAALBB
P	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	11	RASESVDNYgissMN	BBABBABBLLBBBBB
P	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	14	YAASKQGS	BLEABBBB
P	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	85.7	L3	9	L3-9-cis7-1	9	QQSKGVPYT	BBAABBbBB
P	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
R	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100.0	H1	13	H1-13-1	15	AASGFTFSDAWMD	BBBLBBAAABBBB
R	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	9	EIRNKvnNHATN	BBBBAAALLBBB
R	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	50.0	H3	7	H3-7-*	-1	TGLTFDY	BBLEAAB
R	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	75.0	H4	8	H4-8-1	10	RDDSRSVV	BBAAALBB
S	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	12	RASESVDNYgissMN	BBABBABBLLBBBBB
S	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	15	YAASKQGS	BLLABBBB
S	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	85.7	L3	9	L3-9-cis7-1	5	QQSKGVPYT	BBAABBbBB
S	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	100.0	L4	6	L4-6-1	13	GSGTDF	EBEABB
U	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100.0	H1	13	H1-13-1	16	AASGFTFSDAWMD	BBBLBBAAABBBB
U	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	8	EIRNKvnNHATN	BBBBAAALLBBB
U	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	50.0	H3	7	H3-7-*	-1	TGLTFDY	BBLEAAB
U	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	75.0	H4	8	H4-8-1	9	RDDSRSVV	BBAAALBB
V	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	10	RASESVDNYgissMN	BBABBABBLLBBBBB
V	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	13	YAASKQGS	BLEABBBB
V	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	85.7	L3	9	L3-9-cis7-1	12	QQSKGVPYT	BBAABBbBB
V	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022