PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5MU2

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100.0	H1	13	H1-13-1	13	AASGFTFSDAWMD	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	7	EIRNKvnNHATN	BBBBAAALLBBB
A	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	50.0	H3	7	H3-7-*	-1	TGLTFDY	BBLEAAB
A	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	75.0	H4	8	H4-8-1	5	RDDSRSVV	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	9	RASESVDNYgissMN	BBABBABBLLBBBBB
B	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	6	YAASKQGS	BLEABBBB
B	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	85.7	L3	9	L3-9-cis7-1	7	QQSKGVPYT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	100.0	L4	6	L4-6-1	3	GSGTDF	EBEABB
C	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100.0	H1	13	H1-13-1	13	AASGFTFSDAWMD	BBBLBBAAABBBB
C	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	6	EIRNKvnNHATN	BBBBAAALLBBB
C	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	50.0	H3	7	H3-7-*	-1	TGLTFDY	BBLEAAB
C	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	75.0	H4	8	H4-8-1	5	RDDSRSVV	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	9	RASESVDNYgissMN	BBABBABBLLBBBBB
D	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	5	YAASKQGS	BLEABBBB
D	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	85.7	L3	9	L3-9-cis7-1	7	QQSKGVPYT	BBAABBbBB
D	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	100.0	L4	6	L4-6-1	3	GSGTDF	EBEABB
E	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100.0	H1	13	H1-13-1	14	AASGFTFSDAWMD	BBBLBBAAABBBB
E	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	6	EIRNKvnNHATN	BBBBAAALLBBB
E	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	50.0	H3	7	H3-7-*	-1	TGLTFDY	BBLEAAB
E	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	75.0	H4	8	H4-8-1	5	RDDSRSVV	BBAAALBB
F	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	9	RASESVDNYgissMN	BBABBABBLLBBBBB
F	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	6	YAASKQGS	BLEABBBB
F	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	85.7	L3	9	L3-9-cis7-1	7	QQSKGVPYT	BBAABBbBB
F	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	100.0	L4	6	L4-6-1	3	GSGTDF	EBEABB
G	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100.0	H1	13	H1-13-1	13	AASGFTFSDAWMD	BBBLBBAAABBBB
G	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	6	EIRNKvnNHATN	BBBBAAALLBBB
G	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	50.0	H3	7	H3-7-*	-1	TGLTFDY	BBLEAAB
G	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	75.0	H4	8	H4-8-1	5	RDDSRSVV	BBAAALBB
H	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	9	RASESVDNYgissMN	BBABBABBLLBBBBB
H	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	5	YAASKQGS	BLEABBBB
H	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	85.7	L3	9	L3-9-cis7-1	7	QQSKGVPYT	BBAABBbBB
H	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	100.0	L4	6	L4-6-1	3	GSGTDF	EBEABB
I	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100.0	H1	13	H1-13-1	13	AASGFTFSDAWMD	BBBLBBAAABBBB
I	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	6	EIRNKvnNHATN	BBBBAAALLBBB
I	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	50.0	H3	7	H3-7-*	-1	TGLTFDY	BBLEAAB
I	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	75.0	H4	8	H4-8-1	5	RDDSRSVV	BBAAALBB
J	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	9	RASESVDNYgissMN	BBABBABBLLBBBBB
J	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	6	YAASKQGS	BLEABBBB
J	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	85.7	L3	9	L3-9-cis7-1	7	QQSKGVPYT	BBAABBbBB
J	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	100.0	L4	6	L4-6-1	3	GSGTDF	EBEABB
K	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100.0	H1	13	H1-13-1	13	AASGFTFSDAWMD	BBBLBBAAABBBB
K	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	7	EIRNKvnNHATN	BBBBAAALLBBB
K	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	50.0	H3	7	H3-7-*	-1	TGLTFDY	BBLEAAB
K	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	75.0	H4	8	H4-8-1	6	RDDSRSVV	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	9	RASESVDNYgissMN	BBABBABBLLBBBBB
L	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	5	YAASKQGS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	85.7	L3	9	L3-9-cis7-1	7	QQSKGVPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	100.0	L4	6	L4-6-1	3	GSGTDF	EBEABB
M	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100.0	H1	13	H1-13-1	13	AASGFTFSDAWMD	BBBLBBAAABBBB
M	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	7	EIRNKvnNHATN	BBBBAAALLBBB
M	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	50.0	H3	7	H3-7-*	-1	TGLTFDY	BBLEAAB
M	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	75.0	H4	8	H4-8-1	6	RDDSRSVV	BBAAALBB
N	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	9	RASESVDNYgissMN	BBABBABBLLBBBBB
N	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	6	YAASKQGS	BLEABBBB
N	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	85.7	L3	9	L3-9-cis7-1	7	QQSKGVPYT	BBAABBbBB
N	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	100.0	L4	6	L4-6-1	3	GSGTDF	EBEABB
O	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100.0	H1	13	H1-13-1	14	AASGFTFSDAWMD	BBBLBBAAABBBB
O	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	6	EIRNKvnNHATN	BBBBAAALLBBB
O	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	50.0	H3	7	H3-7-*	-1	TGLTFDY	BBLEAAB
O	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	75.0	H4	8	H4-8-1	5	RDDSRSVV	BBAAALBB
P	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	9	RASESVDNYgissMN	BBABBABBLLBBBBB
P	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	5	YAASKQGS	BLEABBBB
P	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	85.7	L3	9	L3-9-cis7-1	7	QQSKGVPYT	BBAABBbBB
P	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	100.0	L4	6	L4-6-1	3	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022