PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5MES

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H1	13	H1-13-1	11	AASGFTFSSYSMN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H2	10	H2-10-2	8	SISSSSSYIY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H3	12	H3-12-1	16	ARQVGATWAFDI	BBBBAAALBBAB
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H4	8	H4-8-1	5	RDNAKNSL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	100.0	L1	13	L1-13-1	4	SGSSSNIGSNTVN	BBBAAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	100.0	L2	8	L2-8-1	8	YSNNQRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	88.9	L3	11	L3-11-1	8	AAWDDSLNAWV	BBBBAAALBBB
L	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	100.0	L4	6	L4-6-2	9	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022