PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5M30

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.4	Al_IGHV3S53*01_VHH	61.5	H1	13	H1-13-5	10	AASGSISGIVVMA	BBBEBAAABABBB
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.4	Al_IGHV3S53*01_VHH	77.8	H2	9	H2-9-1	11	SITSGGTTN	BBBAALBBB
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.4	Al_IGHV3S53*01_VHH	50.0	H3	13	H3-13-*	-1	KAFFRRDYVGYDY	BBBBBBBbBBBBB
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.4	Al_IGHV3S53*01_VHH	62.5	H4	8	H4-8-1	10	KDNAENTL	BBAAALBB
E	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.4	Al_IGHV3S53*01_VHH	61.5	H1	13	H1-13-5	9	AASGSISGIVVMA	BBBEBAAABABBB
E	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.4	Al_IGHV3S53*01_VHH	77.8	H2	9	H2-9-1	11	SITSGGTTN	BBBAALBBB
E	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.4	Al_IGHV3S53*01_VHH	50.0	H3	13	H3-13-*	-1	KAFFRRDYVGYDY	BBBBBBLLBBBBB
E	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.4	Al_IGHV3S53*01_VHH	62.5	H4	8	H4-8-1	9	KDNAENTL	BBAAALBB
F	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.4	Al_IGHV3S53*01_VHH	61.5	H1	13	H1-13-5	9	AASGSISGIVVMA	BBBEBAAABABBB
F	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.4	Al_IGHV3S53*01_VHH	77.8	H2	9	H2-9-1	11	SITSGGTTN	BBBAALBBB
F	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.4	Al_IGHV3S53*01_VHH	50.0	H3	13	H3-13-*	-1	KAFFRRDYVGYDY	BBBBBBLLBBBBB
F	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.4	Al_IGHV3S53*01_VHH	62.5	H4	8	H4-8-1	10	KDNAENTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022