PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5M2M

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Lama.glama	La_IGHV1S2*01_VHH	86.3	CDRLenMismatch	-1.0	H1	18	H1-18-*	-1	AASGRTFSDhsgytYTIG
D	heavy	Lama.glama	La_IGHV1S2*01_VHH	86.3	La_IGHV1S2*01_VHH	50.0	H2	10	H2-10-1	11	RIYWSSGNTY	BBBAAALBBB
D	heavy	Lama.glama	La_IGHV1S2*01_VHH	86.3	La_IGHV1S2*01_VHH	100.0	H3	17	H3-17-*	-1	AARDGiptSRSVESYNY
D	heavy	Lama.glama	La_IGHV1S2*01_VHH	86.3	La_IGHV1S2*01_VHH	75.0	H4	8	H4-8-1	17	RDIAKNTV	BBAAALBB
E	heavy	Lama.glama	La_IGHV1S2*01_VHH	86.3	CDRLenMismatch	-1.0	H1	18	H1-18-*	-1	AASGRTFSDhsgytYTIG
E	heavy	Lama.glama	La_IGHV1S2*01_VHH	86.3	La_IGHV1S2*01_VHH	50.0	H2	10	H2-10-1	11	RIYWSSGNTY	BBBAAALBBB
E	heavy	Lama.glama	La_IGHV1S2*01_VHH	86.3	La_IGHV1S2*01_VHH	100.0	H3	17	H3-17-*	-1	AARDGiptSRSVESYNY
E	heavy	Lama.glama	La_IGHV1S2*01_VHH	86.3	La_IGHV1S2*01_VHH	75.0	H4	8	H4-8-1	13	RDIAKNTV	BBAAALBB
F	heavy	Lama.glama	La_IGHV1S2*01_VHH	86.3	CDRLenMismatch	-1.0	H1	18	H1-18-*	-1	AASGRTFSDhsgytYTIG
F	heavy	Lama.glama	La_IGHV1S2*01_VHH	86.3	La_IGHV1S2*01_VHH	50.0	H2	10	H2-10-1	10	RIYWSSGNTY	BBBAAALBBB
F	heavy	Lama.glama	La_IGHV1S2*01_VHH	86.3	La_IGHV1S2*01_VHH	100.0	H3	17	H3-17-*	-1	AARDGiptSRSVESYNY
F	heavy	Lama.glama	La_IGHV1S2*01_VHH	86.3	La_IGHV1S2*01_VHH	75.0	H4	8	H4-8-1	16	RDIAKNTV	BBAAALBB
H	heavy	Lama.glama	La_IGHV1S2*01_VHH	86.3	CDRLenMismatch	-1.0	H1	18	H1-18-*	-1	AASGRTFSDhsgytYTIG
H	heavy	Lama.glama	La_IGHV1S2*01_VHH	86.3	La_IGHV1S2*01_VHH	50.0	H2	10	H2-10-1	11	RIYWSSGNTY	BBBAAALBBB
H	heavy	Lama.glama	La_IGHV1S2*01_VHH	86.3	La_IGHV1S2*01_VHH	100.0	H3	17	H3-17-*	-1	AARDGiptSRSVESYNY
H	heavy	Lama.glama	La_IGHV1S2*01_VHH	86.3	La_IGHV1S2*01_VHH	75.0	H4	8	H4-8-1	15	RDIAKNTV	BBAAALBB
J	heavy	Lama.glama	La_IGHV1S2*01_VHH	86.3	CDRLenMismatch	-1.0	H1	18	H1-18-*	-1	AASGRTFSDhsgytYTIG
J	heavy	Lama.glama	La_IGHV1S2*01_VHH	86.3	La_IGHV1S2*01_VHH	50.0	H2	10	H2-10-1	11	RIYWSSGNTY	BBBAAALBBB
J	heavy	Lama.glama	La_IGHV1S2*01_VHH	86.3	La_IGHV1S2*01_VHH	100.0	H3	17	H3-17-*	-1	AARDGiptSRSVESYNY
J	heavy	Lama.glama	La_IGHV1S2*01_VHH	86.3	La_IGHV1S2*01_VHH	75.0	H4	8	H4-8-1	15	RDIAKNTV	BBAAALBB
N	heavy	Lama.glama	La_IGHV1S2*01_VHH	86.3	CDRLenMismatch	-1.0	H1	18	H1-18-*	-1	AASGRTFSDhsgytYTIG
N	heavy	Lama.glama	La_IGHV1S2*01_VHH	86.3	La_IGHV1S2*01_VHH	50.0	H2	10	H2-10-1	11	RIYWSSGNTY	BBBAAALBBB
N	heavy	Lama.glama	La_IGHV1S2*01_VHH	86.3	La_IGHV1S2*01_VHH	100.0	H3	17	H3-17-*	-1	AARDGiptSRSVESYNY
N	heavy	Lama.glama	La_IGHV1S2*01_VHH	86.3	La_IGHV1S2*01_VHH	75.0	H4	8	H4-8-1	13	RDIAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022